Dann Group @ IU


 

Publications

  • Gao X, Dong X, Subramanian S, Matthews PM, Cooper CA, Kearns DB, Dann CE 3rd. Engineered Bacillus subtilis strains allow rapid characterization of heterologous diguanylate cyclases and phosphodiesterases. Appl Environ Microbiol. 2014 Oct; 80(19), 6167-74. Epub 1 August 2014.
  • Chang F-MJ, Coyne HJ, Cubillas-Ramirez CA, Fleischmann PV, Fang X, Ma Z, Ma D, Helmann JD, García-de los Santos A, Wang Y-X, Dann CE 3rd, Giedroc DP. Cu(I)-mediated allosteric switching in a copper-sensing operon repressor (CsoR). J Biol Chem. 2014 Jul 4; 289(27):19204-19217. Epub 2014 May 15 doi:10.1074/jbc.M114.552380.
  • Yin L, Dragnea V, Feldman G, Hammad LA, Karty JA, Dann CE 3rd, Bauer CE. Redox and light control the heme-sensing activity of AppA. MBio. 2013 Aug 27;4(5):e00563-13. doi: 10.1128/mBio.00563-13. PubMed PMID: 23982072; PubMed Central PMCID: PMC3760249.
  • Gao X, Mukherjee S, Matthews PM, Hammad LA, Kearns DB, Dann CE 3rd. Functional Characterization of Core Components of the Bacillus subtilis Cyclic-Di-GMP Signaling Pathway. J Bacteriol. 2013 Nov;195(21):4782-92. doi: 10.1128/JB.00373-13. Epub 2013 Jul 26. PubMed PMID: 23893111. Highlighted in journal with an article written by Rita Tamayo. The characterization of a cyclic-di-GMP (c-di-GMP) pathway leads to a new tool for studying c-di-GMP metabolic genes. J Bacteriol. 2013 Nov;195(21):4779-81. doi: 10.1128/JB.00925-13. Epub 2013 Aug 16. PubMed PMID: 23955008; PubMed Central PMCID: PMC3807499.
  • Wibowo AS, Singh M, Reeder KM, Carter JJ, Kovach AR, Meng W, Ratnam M, Zhang F, Dann CE 3rd. Structures of human folate receptors reveal biological trafficking states and diversity in folate and antifolate recognition. Proc Natl Acad Sci U S A. 2013 Sep 17;110(38):15180-8. doi: 10.1073/pnas.1308827110. Epub 2013 Aug 9. PubMed PMID: 23934049; PubMed Central PMCID: PMC3780903. Highlighted by National Institutes of Health Director Francis Collins on the NIH Director’s blog.
  • Fu Y, Tsui HC, Bruce KE, Sham LT, Higgins KA, Lisher JP, Kazmierczak KM, Maroney MJ, Dann CE 3rd, Winkler ME, Giedroc DP "A new structural paradigm in copper resistance in Streptococcus pneumoniae." Nat Chem Biol. 2013 Mar; 9(3):177-83. doi: 10.1038/nchembio.1168. Epub 2013 Jan 27.
  • Campanello GC, Ma Z, Grossoehme NE, Guerra AJ, Ward BP, Dimarchi RD, Ye Y, Dann CE 3rd, Giedroc DP. "Allosteric inhibition of a zinc-sensing transcriptional repressor: Insights into the arsenic repressor (ArsR) family." J Mol Biol. 2013 Apr 12;425(7):1143-57. doi: 10.1016/j.jmb.2013.01.018. Epub 2013 Jan 23.
  • Gwon AR, Park JS, Arumugam TV, Kwon YK, Chan SL, Kim SH, Baik SH, Yang S, Yun YK, Choi Y, Kim S, Tang SC, Hyun DH, Cheng A, Dann CE 3rd, Bernier M, Lee J, Markesbery WR, Mattson MP, Jo DG. "Oxidative lipid modification of nicastrin enhances amyloidogenic γ-secretase activity in Alzheimer's disease." Aging Cell. 2012 Aug;11(4):559-68. doi: 10.1111/j.1474-9726.2012.00817. Epub 2012 Apr 9.
  • Guerra AJ, Dann CE 3rd, Giedroc DP. "Crystal Structure of the Zinc-Dependent MarR Family Transcriptional Regulator AdcR in the Zn(II)-Bound State." J Amer Chem Soc. 2011 Dec 14;133(49):19614-7. doi: 10.1021/ja2080532. Epub 2011 Nov 21.
  • Dann CE 3rd. "RNA Structure: Riboswitch Strikes a Chord." Nat Chem Biol.2011 Sep 19;7(10):660-1. doi: 10.1038/nchembio.672
  • Packianathan C, Katen SP, Dann CE 3rd, Zlotnick A. "Conformational changes in the hepatitis B virus core protein are consistent with a role for allostery in virus assembly." J Virol. 2010 Feb;84(3):1607-15. doi: 10.1128/JVI.02033-09. Epub 2009 Nov 25.
  • Grossoehme NE, Li L, Keane SC, Liu P, Dann CE 3rd, Leibowitz JL, Giedroc DP. "Coronavirus N protein N-terminal domain (NTD) specifically binds the transcriptional regulatory sequence (TRS) and melts TRS-cTRS RNA duplexes." J Mol Biol. 2009 Dec 4;394(3):544-57. doi: 10.1016/j.jmb.2009.09.040. Epub 2009 Sep 24.
  • Dann CE 3rd, Wakeman CA, Sieling CL, Baker SC, Irnov I, Winkler WC. "Structure and Mechanism of a Metal-Sensing Regulatory RNA." Cell. 2007 Sep 7;130(5):878-92.
  • Wakeman CA, Winkler WC, Dann CE 3rd. "Structural Features of Metabolite-Sensing Riboswitches." Trends Biochem Sci. 2007 Sep;32(9):415-24. Epub 2007 Aug 30. Review.
  • Dann CE 3rd, Winkler WC. "RNA allostery glimpsed." Nat Struct Mol Biol. 2006 Jul;13(7):569-71. (News and Views).
  • Dann CE 3rd, Bruick RK. "Dioxygenases as O2-dependent regulators of the hypoxic response pathway." Biochem Biophys Res Commun.2005 Dec 9;338(1):639-47. Epub 2005 Aug 26. Review.
  • Shah S, Lee SF, Tabuchi K, Hao YH, Yu C, LaPlant Q, Ball H, Dann CE 3rd, Sudhof T, Yu G. "Nicastrin functions as a gamma-secretase-substrate receptor." Cell. 2005 Aug 12;122(3):435-47.
  • Hamaoka B, Dann CE 3rd, Geisbrecht BV, Leahy DJ. "Crystal structure of Caenorhabditis elegans HER-1 and characterization of the interaction between HER-1 and TRA 2A." Proc Natl Acad Sci U S A. 2004 Aug 10;101(32):11673-8. Epub 2004 Aug 2.
  • Dann CE 3rd, Bruick RK, Deisenhofer J. "Structure of factor-inhibiting hypoxia-inducible factor 1: An asparaginyl hydroxylase involved in the hypoxic response pathway." Proc Natl Acad Sci U S A. 2002 Nov 26;99(24):15351-6. Epub 2002 Nov 13.
  • Dann CE 3rd, Hsieh JC, Rattner A, Sharma D, Nathans J, Leahy DJ. "Insights into Wnt binding and signalling from the structures of two Frizzled cysteine-rich domains." Nature. 2001 Jul 5;412(6842):86-90.
  • Ooi SL, Dann C 3rd, Nam K, Leahy DJ, Dahma MJ, Boeke JD. "Ribonucleases, Part A: Functional Roles and Mechanisms of Action. 'RNA lariat debranching enzyme.'" Methods in Enzymology 2001;341.
  • Leahy DJ, Dann CE 3rd, Longo P, Perman B, Ramyar K "A mammalian expression vector for expression and purification of secreted proteins for structural studies." Protein Expr Purif. 2000 Dec;20(3):500-6.
  • Ward TJ, Dann CE 3rd, Brown AP. "Separation of enantiomers using vancomycin in a countercurrent process by suppression of electroosmosis." Chirality. 1996 Jan;8(1):77-83. doi: 10.1002/(SICI)1520-636X(1996)8:1<77::AID-CHIR13>3.0.CO;2-P
  • Ward TJ, Dann CE 3rd, Blaylock A. "Enantiomeric resolution using the macrocyclic antibiotics rifamycin B and rifamycin SV as chiral selectors for capillary electrophoresis." J Chromatogr A. 1995 Nov 3;715(2):337-44.
PubMed

 

 

Page updated 21 August 2013