Vocabularly of Mixed and Multilevel Models

Models for multilevel data have developed out of methods for analyzing experiments with random effects. Thus it is important for those interested in using hierarchical linear models to have a minimal understanding of the language experimental researchers use to differentiate between effects considered to be random or fixed. In an ideal experiment, the researcher is interested in whether or not the presence or absence of one factor affects scores on an outcome variable. (In the parlance of experiments, a factor is a categorical variable; the term covariate refers to continuous independent variables.) Does a particular pill reduce cholesterol more than a placebo? Can behavioral modification reduce a particular phobia better than psychoanalysis or no treatment? The factors in these experiments are said to be fixed {}``because the same, fixed levels would be included in replications of the study'' (Maxwell and Delaney, pg. 469). That is, the researcher is only interested in the exact categories of the factor that appear in the experiment. The typical model for a one-factor experiment is:

where the score on the dependent variable for individual i is equal to the grand mean of the sample (μ), the effect α of receiving treatment j, and an individual error term e_ij. In general, some kind of constraint is put on the alpha values, such as that they sum to zero, so that the model is identified. In addition, it is assumed that the errors are independent and normally distributed with constant variance.

In some experiments, however, a particular factor may not be fixed and perfectly replicable across experiments. Instead, the distinct categories present in the experiment represent a random sample from a larger population. For example, different nurses may administer an experimental drug to subjects. Usually the effect of a specific nurse is not of theoretical interest, but the researcher will want to control for the possibility that an independent caregiver effect is present beyond the fixed drug effect being investigated. In such cases the researcher may add a term to control for the random effect:

where β represents the effect of the kth level of the random effect, and αβ represents the interaction between the random and fixed effects. A model that contains only fixed effects and no random effects, such as equation 1, is known as a fixed effects model. One that includes only random effects and no fixed effects is termed a random effects model. Equation 2 is actually an example of a mixed effects model because it contains both random and fixed effects.

While the notation in equation 2 for the random effect is the same as for the fixed effect (that is, both are denoted by subscripted Greek letters), an important difference exists in the tests for the drug and nurse factors. For the fixed effect, the researcher is interested in only those levels included in the experiment, and the null hypothesis is that there are no differences in the means of each treatment group:

For the random effect in the drug example, the researcher is not interested in the particular nurses per se but instead wishes to generalize about the potential effects of drawing different nurses from the larger population. The null hypothesis for the random effect is therefore that its variance is equal to zero:

The estimated variance is known as a variance component, and estimation of these is an essential step in mixed effects models.

Oftentimes in experimental settings, the random effects are nuisances that necessitate statistical controls. In the above example, the effect of the drug was the primary interest, whereas the nurse factor was potentially confounding but theoretically uninteresting. It is nonetheless necessary to include the relevant random effects in the model or otherwise run the risk of making false inferences about the fixed effect (and any fixed/random effect interaction). In other applications, particularly for the types of multi-level models discussed below, the random effects are of substantive interest. A researcher comparing test scores of students across schools may be interested in a school effect, even if it is only possible to sample a limited number of districts.

The reason to review random effects in the context of experiments is that methods for handling multilevel data are actually special cases of mixed effects models. Hox and Kreft (1994) make the connection clearly:

For scholars coming from non-experimental disciplines (i.e. those that rely more heavily on regression models than analysis of variance), it may be difficult to make sense of the documentation for statistical applications capable of estimating mixed models. Political scientists and sociologists, for example, come to utilize mixed models because they recognize that hierarchically structured data violate standard linear regression assumptions. However, because mixed models developed out of methods for evaluating experiments, much of the documentation for packages like SPSS, Stata, SAS and R is based on examples from experimental research. Hence it is important to recognize the connection between random effects ANOVA and hierarchical linear models.

Note that the motivation for utilizing mixed models for multilevel data does not rest on the different number of observations at each level, as any model including a dummy variable involves nesting (e.g. survey respondents are nested within gender). The justification instead lies in the fact that the errors within each randomly sampled level-2 unit are likely correlated, necessitating the estimation of a random effects model. Once the researcher has accounted for error non-independence it is possible to make more accurate inferences about the fixed effects of interest.