tmRNA-Encoded Proteolysis Tags MPhage_Bxz1 (A)ATDTDATVTDAEIEAFFAEE----------AAALV* BaciPhage_G (A)AKLNITNN----------------------ELQVA* Uncul_farm3 (A)GETR--------------------------FALAA* Uncul_farm8 (A)ANDDV-------------------------YAVAA* Aquif_aeoli (A)APEAE-------------------------LALAA* Sulfh_azore (A)IPERE-------------------------IALAA* Thtog_mari1 (A)ANEP--------------------------VAVAA** Thtog_mari2 (A)ANEP--------------------------VAVAA** Thtog_neapo (A)ANEP--------------------------VAVAA** Thdsb_commu (A)ANEYA-------------------------YALAA* Deinc_radio (A)GNQN--------------------------YALAA* Deinc_geoth (A)GNQN--------------------------YALAA* Thmus_ther1 (A)ANTN--------------------------YALAA** Thmus_ther2 (A)ANTN--------------------------YALAA** Uncul_humn3 (A)ANKP--------------------------AALAA** Chlfl_auran (A)ANTNTRAQAR--------------------LALAA*** Thmic_roseu (A)GERE--------------------------LALAA* Dehco_ethen (A)GERE--------------------------LVLAG* Leptm_ferro (A)ANNE--------------------------MALAA* Leptm_grup2 (A)ANEE--------------------------LALAA* Leptm_grup3 (A)ANEE--------------------------LALAA* Therv_yello (A)ANNE--------------------------LALAA* Gloeo_viola (A)ATNNVVPFARAR------------------ATVAA* Proch_mari1 (A)ANKIVSFSRQT-------------------APVAA* Proch_mari2 (A)ANNIVRFSRQP-------------------ALVAA* Proch_mari3 (A)ANKIVSFSRQT-------------------APVAA* Proch_mari4 (A)ANNIVSFSRQT-------------------APVAA* Cyanbi_6307 (A)ANNIVRFSRQA-------------------APVAA* Syncoc_9311 (A)ANNIVRFSRQA-------------------APVAA* Syncoc_9902 (A)ANNIVRFSRQA-------------------APVAA* Syncoc_7009 (A)ANNIVRFSRQA-------------------APVAA* Syncoc_6904 (A)ANNIVRFSRQA-------------------APVAA* Syncoc_9605 (A)ANNIVRFSRQA-------------------APVAA* Syncoc_8102 (A)ANNIVRFSRHA-------------------APVAA* Synco_elong (A)ANNIVPFARKA-------------------APVAA* Syncoc_7002 (A)ANNIVPFARK--------------------AAAVA** Syncys_6803 (A)ANNIVSFKR---------------------VAIAA* Croco_watso (A)ANNIVSFKR---------------------VAVAA* Thsyn_elong (A)ANNIVPFARK--------------------AAAVA* Chrooc_6712 (A)ANNIVKFER---------------------QAVFA* Oscill_6304 (A)ANNIVPFARKA-------------------APVAA* Oscill_7515 (A)ANNIVPFARK--------------------QVAVA* Trchd_eryth (A)ANNIVPFARKQ-------------------VAALA* Leptl_borya (A)ANNIVPFARKT-------------------APVAA* Nostoc_7120 (A)ANNIVKFARKD-------------------ALVAA* Nosto_punct (A)ANNIVNFARKD-------------------ALVAA* Anaba_varia (A)ANNIVKFARKD-------------------ALVAA* Fremy_diplo (A)ANNIVKFARKE-------------------ALVAA** Mesos_virid (A)ANNILPFNRK--------------------TAVAV* Nephr_oliva (A)ANQILPFSRR--------------------VAVAA* Cyanp_parad (A)ATNIVRFNRK--------------------AAFAV** Ampho_coffa (A)ATIITWFISKIINRNACS------------LQFVV* Thala_weiss (A)ANNIIPFIFKAVKTKKEAMA----------LNFAV* Thala_pseud (A)ANNIMPFMFNVVKTNRSLTT----------LNFAV* Odont_sinen (A)ANNLISSVFKSLSTKQNSLN----------LSFAV* Skele_costa (A)ANNIMSFIFKTVTPKNHLNV----------LSFAV* Frgla_pinna (A)ANNIIPFHFKTVNFNNSNL-----------LQFAA* Bolidom_OLI (A)ANNILAFNRK--------------------SLSFA* Pylai_litto (A)ANNIMSFNK---------------------NQVFA* Pavlo_luthe (A)ANNILSFNR---------------------VAVAP** Prymn_parvu (A)ANNILSFNT---------------------KLALA* Emiln_huxle (A)ANNILNFNS---------------------KLAIA* Cydum_calda (A)ANNIIEISNIRK------------------PALVV* Cysch_merol (A)ANQILPFSIPV-------------------KHLAV* Rhoso_marin (A)ANNILKFFTKSP------------------VVAFA* Porpa_purpu (A)AENNIIAFSR--------------------KLAVA* Graci_tenui (A)AKNNILTLSR--------------------RLIYA* Mastc_papil (A)AKHQIVPFSK--------------------RIIVV* Prion_lance (A)AKHQILPLSR--------------------KIALA* Guill_theta (A)ASNIVSFSSKR-------------------LVSFA* Rhomo_salin (A)ANNIVPFSR---------------------KVALV* Bacro_frag1 (A)GETN--------------------------YALAA* Bacro_frag2 (A)GETN--------------------------YALAA* Bacro_theta (A)GETN--------------------------YALAA* Tanne_forsy (A)GENN--------------------------YALAA* Porpm_gingi (A)GENN--------------------------YALAA* Prevo_inter (A)GENN--------------------------YALAA* Prevo_rumin (A)GNNE--------------------------YALAA* Cytph_hutch (A)GEES--------------------------YAMAA* Uncul_farm6 (A)GESN--------------------------YAMAA* Salbr_ruber (A)ADDYS-------------------------YAMAA* Chlbm_tepid (A)ADDYS-------------------------YAMAA* Chlbm_chlch (A)ADDYS-------------------------YAMAA* Caulb_cresc (A)ANDNFAEE----------------------FAVAA* Hyphm_neptu (A)ANDNFAEG----------------------ELLAA* Parcc_denit (A)ANDNRAP-----------------------VALAA* Rhobr_sphae (A)ANDNRAP-----------------------VALAA* Uncul_bone2 (A)ANDNRAP-----------------------MAMAA* Jannas_CCS1 (A)ANDNRAPA----------------------MALAA* Uncul_whal2 (A)ANDNRAP-----------------------VALAA* Silic_pomer (A)ANDNRAP-----------------------VALAA* Silic_TM104 (A)ANDNRAP-----------------------VALAA* Agrbm_tume1 (A)ANDNNAKE----------------------YALAA* Agrbm_tume2 (A)ANDNNAKE----------------------CALAA* Agrbm_vitis (A)ANDNNAQG----------------------YAVAA* Rhizm_legum (A)ANDNYAE-----------------------ARLAA* Uncul_whal6 (A)ANDNYAE-----------------------ARLAA* Sinor_melil (A)ANDNYAE-----------------------ARLAA* Mesrhz_loti (A)ANDNYAE-----------------------ARLAA* Mesrhz_bnc1 (A)ANDNYAE-----------------------ARLAA* Uncul_whal4 (A)ANDNFAEE----------------------VRLAA* Barto_hense (A)ANDNYAE-----------------------ARLAA* Barto_quint (A)ANDNYAE-----------------------ARLAA* Bruce_abort (A)ANDNNAQG----------------------YALAA* Bruce_melit (A)ANDNNAQG----------------------YALAA* Brucel_suis (A)ANDNNAQG----------------------YALAA* Rhops_palu1 (A)ANDNYAP-----------------------VAQAA* Rhops_palu2 (A)ANDNYAP-----------------------VAQAA* Rhops_palu3 (A)ANDNYAP-----------------------VAQAA* Rhops_palu4 (A)ANDNVRMNE---------------------VRLAA* Rhops_palu5 (A)ANDNYAP-----------------------VAQAA* Brdrz_japon (A)ANDNFAP-----------------------VAQAA* Nitbr_hambu (A)ANDNYAP-----------------------VAQAA* Nitbr_winog (A)ANDNYAP-----------------------VAQAA* Nitbr_Nb311 (A)ANDNYAP-----------------------VAQAA* Uncul_farm1 (A)ANDNYAP-----------------------VAQAA* Mebrm_extor (A)ANDNFAP-----------------------VAVAA* Magsp_magn1 (A)ANDNFAP-----------------------VAVAA* Magsp_magn2 (A)ANDNVE------------------------LAAAA* Alprot_SAR1 (A)ANDE--------------------------LALAA* Uncul_whal3 (A)ANDNTEA-----------------------LAVAA* Rhspi_rubru (A)ANDNVE------------------------LAAAA* Gluco_oxyda (A)ANDNSEV-----------------------LAVAA* Nsphg_aroma (A)ANDNEA------------------------LALAA* Sphpx_alask (A)ANDNEA------------------------LALAA* Eryba_litor (A)ANDNEA------------------------LALAA* Uncul_farm4 (A)ANDNEA------------------------LALAA* Uncul_farm5 (A)ANDNEA------------------------LAIAA* Zymom_mobil (A)ANDNEV------------------------LAVAA* Sphin_elode (A)ANDNEA------------------------LAIAA* Ehrli_chaff (A)ANDNFVFANDNNSSA---------------NLVAA* Ehrli_rumi1 (A)ANDNFVSANDNNSTA---------------NLVAA* Ehrli_rumi2 (A)ANDNFVSANDNNSTA---------------NLVAA* Ehrli_canis (A)ANDNFVFANDNNSSVA--------------GLVAA* Anapl_phago (A)ANDDFVAANDNVETA---------------FVAAA* Anapl_margi (A)ANDDFVAANDNMETA---------------FVAAA* Neori_senne (A)ANDNFEAGSAE-------------------YAVAA* Wolbachia_1 (A)ANDNFAAEDNV-------------------DAIAA* Wolbachia_2 (A)ANDNFAAEGD--------------------VAVAA* Wolbachia_3 (A)ANDNFAAEDN--------------------VALAA* Wolbachia_4 (A)ANDNFAAEE---------------------YRVAA* Ricke_prowa (A)ANDNRYVGVP--------------------ALAAA* Ricke_typhi (A)ANDNKRYVGVA-------------------ALAAA* Ricke_akari (A)ANDNNRSVD---------------------LALAA* Ricke_felis (A)ANDNNRYVG---------------------AALAA* Ricke_ricke (A)ANDNNRSVGR--------------------LALAA* Ricke_cono1 (A)ANDNNRSVGH--------------------LALAA* Ricke_sibir (A)ANDNNRSVGH--------------------LALAA* Tremb_prin1 (A)APSNRFTIVANDCIDALV------------RRAVV* Tremb_prin2 (A)APSNRFTMVANDRTFALV------------GRAAV* Tremb_prin3 (A)APRNRFTMVANDSMFALA------------GRAAV* Tremb_prin4 (A)ATSNRFAMVANDCQFALV------------GRAAV* Tremb_prin5 (A)APRNRFTRVTNDSKFALV------------GRAAV* Tremb_prin6 (A)APSKRFTMVTNDSKFALV------------GRAAV* Neiss_gono1 (A)ANDET-------------------------YALAA* Neiss_gono2 (A)ANDET-------------------------YALAA* Neiss_lacta (A)ANDET-------------------------YALAA* Neiss_meni1 (A)ANDET-------------------------YALAA* Neiss_meni2 (A)ANDET-------------------------YALAA* Neiss_meni3 (A)ANDET-------------------------YALAA* Chrbm_viol1 (A)ANDET-------------------------YALAA* Chrbm_viol2 (A)ANDET-------------------------YALAA* Uncultu_U02 (A)ANDEQ-------------------------FALAA* Nisom_europ (A)ANDEN-------------------------YALAA* Nisom_cryot (A)ANDEN-------------------------YALAA* Nissp_multf (A)ANDEN-------------------------YALAA* Uncultu_U04 (A)ANDET-------------------------YALAA* Mebcl_glyco (A)ANDET-------------------------YALAA* Mebcl_flage (A)ANDET-------------------------YALAA* Uncul_farm7 (A)ANDET-------------------------YALAA* Uncul_poln1 (A)ANDNS-------------------------YALAA* Azoarc_BH72 (A)ANDER-------------------------FALAA* Azoarc_EbN1 (A)ANDER-------------------------FAVAA* Decmo_aroma (A)ANDEQ-------------------------FAIAA* Decmo_agita (A)ANDEQ-------------------------FAIAA* Azosp_oryza (A)ANDER-------------------------FAIAA* Thibl_denit (A)ANDEN-------------------------YALAA* Comam_testo (A)ANDER-------------------------FALAA* Uncul_srat1 (A)ANDER-------------------------FALAA* Uncul_rice2 (A)ANDER-------------------------FALAA* Uncul_aede1 (A)ANDER-------------------------FALAA* Polmo_JS666 (A)ANDER-------------------------FALAA** Varvx_parad (A)ANDER-------------------------FALAA* Hydro_palle (A)ANDER-------------------------FALAA* Rubri_gelat (A)ANDER-------------------------FALAA* Ralst_picke (A)ANDER-------------------------YALAA* Ralst_solan (A)ANDNR-------------------------YQLAA* Cupri_necat (A)ANDER-------------------------YALAA* Ralst_eutro (A)ANDER-------------------------YALAA* Ralst_metal (A)ANDER-------------------------YALAA* Burkh_thail (A)ANDDT-------------------------FALAA* Burkh_pseud (A)ANDDT-------------------------FALAA* Burkh_malle (A)ANDDT-------------------------FALAA* Burkh_fungo (A)ANDDT-------------------------FALAA* Burkh_cenoc (A)ANDDT-------------------------FALAA* Burkh_vietn (A)ANDDT-------------------------FALAA* Burkh_sp383 (A)ANDDT-------------------------FALAA* Alcal_visco (A)ANDER-------------------------FALAA* Uncul_root1 (A)ANDER-------------------------FALAA* Alcal_faeca (A)ANDER-------------------------FALAA* Borde_pertu (A)ANDER-------------------------FALAA* Borde_parap (A)ANDER-------------------------FALAA* Borde_bronc (A)ANDER-------------------------FALAA* Borde_avium (A)ANDER-------------------------FALAA* Acthi_ferr1 (A)ANDSN-------------------------YALAA* Acthi_ferr2 (A)ANDSN-------------------------YALAA* Xylel_fast1 (A)ANEDN-------------------------FAVAA* Xylel_fast2 (A)ANEDN-------------------------FALAA* Xylel_fast3 (A)ANEDN-------------------------FAIAA* Xylel_fast4 (A)ANEDN-------------------------FALAA* Xanmo_camp1 (A)ANDDNYGSD---------------------FAIAA* Xanmo_camp2 (A)ANDDNYGSD---------------------SAIAA* Xanmo_axono (A)ANDDNYGSD---------------------FAIAA* Xanmo_oryza (A)ANDDNYGSD---------------------FAIAA* Uncul_rice4 (A)ANDDN-------------------------YALAA* Uncult_U01a (A)ANDSN-------------------------YALAA* Uncult_U01b (A)ANDSN-------------------------YALAA* Steno_malto (A)ANDDN-------------------------YALAA* Diche_nodos (A)ANDDN-------------------------YALAA* Franc_tula1 (A)GNKKANRVAANDSNFAA-------------VAKAA* Franc_tula2 (A)GNKKANRVAANDSNFAA-------------VAKAA* Thmic_cruno (A)ANDDN-------------------------YALAA* Ntsco_ocean (A)ANDDN-------------------------YALAA* Uncul_whal1 (A)ANDDN-------------------------YALAA* Legio_pneum (A)ANDENFAGG---------------------EAIAA** Bctr_SAR1_2 (A)ADNG--------------------------QMAFA* Shew_SAR2_2 (A)ADYG--------------------------YMAAA* Coxie_burne (A)ANDSNYL-----------------------QEAYA* Mecoc_capsu (A)ANDDV-------------------------YALAA* Shew_SAR1_2 (A)ANNDN-------------------------YALAA* Uncult_EBAC (A)ANNDN-------------------------YALAA* Azotb_vinel (A)ANDDN-------------------------YALAA* Psmon_aerug (A)ANDDN-------------------------YALAA* Psmon_syri1 (A)ANDENYG-----------------------AQLAA* Psmon_syri2 (A)ANDETYGE----------------------YALAA* Psmon_syri3 (A)ANDENYG-----------------------AQLAA* Psmon_fluo1 (A)ANDDQYG-----------------------AALAA* Psmon_fluo2 (A)ANDENYGQE---------------------FALAA* Psmon_fluo3 (A)ANDETYGD----------------------YALAA* Psmon_fluo4 (A)ANDETYGE----------------------YALAA* Psmon_chlor (A)ANDETYGE----------------------YALAA* Psmon_puti1 (A)ANDENYGAE---------------------YKLAA* Psmon_puti2 (A)ANDETYGEET--------------------YALAA* Morax_catar (A)ANDET-------------------------YALAA* Acinbr_ADP1 (A)ANDET-------------------------YALAA* Uncul_reman (A)ANDES-------------------------YALAA* Uncul_bone3 (A)ANDET-------------------------YALAA* Psycb_cryha (A)ANDEN-------------------------YALAA* Psycb_arcti (A)ANDEN-------------------------YALAA* Psycb_urati (A)ANDEN-------------------------YALAA* Chrha_salex (A)ANDDNYAQ----------------------GALAA* Marbr_hydro (A)ANDEN-------------------------YALAA* Marbr_aquae (A)ANDEN-------------------------YALAA* Micbu_degra (A)ANDDNYG-----------------------AQLAA* Uncul_flatw (A)ANDDNYG-----------------------AQLAA* Gamprb_SAR1 (A)ANNYN-------------------------YSLAA* Colwe_psych (A)ANDDT-------------------------FALAA* Psalt_halop (A)ANDDN-------------------------YSLAA* Psalt_halo2 (A)ANDDN-------------------------YSLAA* Psalt_atlan (A)ANDEN-------------------------YALAA** Shewa_oneid (A)ANDDN-------------------------YALAA* Shewa_putre (A)ANDDN-------------------------YALAA* Shewa_spPV4 (A)ANDDN-------------------------YALAA* Shewa_denit (A)ANDSN-------------------------YSLAA* Shewa_frigi (A)ANDSN-------------------------YSLAA* Shewa_amazo (A)ANDDN-------------------------YALAA* Shewa_balti (A)ANDSN-------------------------YSLAA* Shew_SAR1_1 (A)ANDDN-------------------------YALAA* Shewan_ANA3 (A)ANDDN-------------------------YALAA* Uncult_WW11 (A)ANDDN-------------------------YALAA* Idiom_loihi (A)ANDDN-------------------------YALAA** Phobm_phosp (A)ANDEN-------------------------YALAA* Phobm_profu (A)ANDEN-------------------------FALAA** Vibro_fisch (A)ANDEN-------------------------YALAA** Vibro_chole (A)ANDEN-------------------------YALAA* Vibro_sEx25 (A)ANDEN-------------------------YALAA** Vibro_parah (A)ANDEN-------------------------YALAA* Vibro_vulni (A)ANDEN-------------------------YALAA** Aermo_hydr1 (A)ANDEN-------------------------YALAA** Aermo_hydr2 (A)ANDEN-------------------------YALAA** Aermo_salmo (A)ANDEN-------------------------YALAA** Uncult_VLW3 (A)ANDEN-------------------------YALAA** Uncul_VLS13 (A)ANDEN-------------------------YALAA** Uncultu_WW9 (A)ANDEN-------------------------YALAA** Uncult_WW10 (A)ANDEN-------------------------YALAV** Uncult_VLW5 (A)ANDEN-------------------------YALAA** Uncult_VLW6 (A)ANDEN-------------------------YALAA** Uncult_RCA4 (A)ANDET-------------------------YALAA** Uncult_RCA7 (A)ANDET-------------------------YALAA** Uncult_LEM1 (A)ANDET-------------------------YALAA** Uncult_LEM2 (A)ANDET-------------------------HALAA* Wiggl_gloss (A)AKHKYNEP----------------------ALLAA* Bloch_flori (A)AKNKYNEP----------------------VALAA* Bloch_penns (A)ANNTTYRES---------------------VALAA* Uncul_aphi2 (A)ANNKQH------------------------YALAA* Buchn_aphi1 (A)ANNKQN------------------------YALAA* Buchn_aphi2 (A)ANNKQN------------------------YALAA* Buchn_aphi3 (A)AKQNQ-------------------------YALAA** Phorh_asymb (A)ANDNE-------------------------YALVA** Phorh_lumin (A)ANDEK-------------------------YALAA** Shige_dyse1 (A)ANDEN-------------------------YALAA** Shige_dyse2 (A)ANDEN-------------------------YALAA** Shige_boydi (A)ANDEN-------------------------YALAA** Shige_flexn (A)ANDEN-------------------------YALAA** Shige_sonne (A)ANDEN-------------------------YALAA** Esche_coli1 (A)ANDEN-------------------------YALAA** Esche_coli2 (A)ANDEN-------------------------YALAA** Esche_coli3 (A)ANDEN-------------------------YALAA** Esche_coli4 (A)ANDEN-------------------------YALAA** Entbr_cloac (A)ANDEN-------------------------YALAA** Entbr_aerog (A)ANDEN-------------------------YALAA** Entbr_sakaz (A)ANDEN-------------------------YALAA** Provi_rettg (A)ANDEN-------------------------YALAA** Serra_marc1 (A)ANDEN-------------------------YALAA* Serra_marc2 (A)ANDEN-------------------------YALAA* Panto_stewa (A)ANDEN-------------------------YALAA** Prots_mirab (A)ANDNQY------------------------KALAA** Prots_vulga (A)ANDNQY------------------------EALAA** Klebs_pneum (A)ANDEN-------------------------YALAA** Klebs_aerog (A)ANDEN-------------------------YALAA** Erwin_carot (A)ANDEN-------------------------YALAA** Erwin_amylo (A)ANDENFAP----------------------AALAA* Erwin_chrys (A)ANDENFAP----------------------AALAA* Salmo_bongo (A)ANDEN-------------------------YALAA** Salmo_ente1 (A)ANDET-------------------------YALAA** Salmo_ente2 (A)ANDEN-------------------------YALAA** Salmo_ente3 (A)ANDET-------------------------YALAA** Salmo_ente4 (A)ANDEN-------------------------YALAA** Salmo_ente5 (A)ANDET-------------------------YALAA** Salmo_ente6 (A)ANDEN-------------------------YALAA** Citbr_roden (A)ANDEN-------------------------YALAA** Uncult_RCA1 (A)ANDEN-------------------------YALAA* Uncult_VLS1 (A)ANDEN-------------------------YALAA** Uncult_VLS3 (A)ANDEN-------------------------YALAA** Uncult_VLS4 (A)ANDEN-------------------------YALAA** Uncultu_WW1 (A)ANDEN-------------------------YALAA** Uncult_RCA2 (A)SNDEN-------------------------YALAA** Uncultu_WW2 (A)ANDEN-------------------------YALAA** Uncultu_WW3 (A)ANDEN-------------------------YALAA** Uncultu_QL1 (A)ANVEN-------------------------YALAA** Uncultu_WW4 (A)ANDGN-------------------------YALAA** Uncult_VLS6 (A)ANDEN-------------------------YALAA** Uncultu_FS2 (A)ANDEN-------------------------YALAA** Uncultu_WW5 (A)ANDEN-------------------------YALAA** Uncultu_WW6 (A)ANDEN-------------------------YALAA** Uncult_VLW1 (A)ANDEN-------------------------YALAA** Uncult_VLS7 (A)ANDEN-------------------------YALAA** Uncult_VLS8 (A)ANDEN-------------------------YALAA** Uncult_VLS9 (A)ANDEN-------------------------YALAA* Uncult_VLW2 (A)ANDEN-------------------------YALAA** Uncultu_WW7 (A)ANDEN-------------------------CALAA** Uncultu_WW8 (A)ANDEN-------------------------YALAA** Yersi_pesti (A)ANDEN-------------------------YALAA** Yersi_pseud (A)ANDEN-------------------------YALAA** Yersi_enter (A)ANDSQYES----------------------AALAA* Yersi_inmed (A)ANDSQYES----------------------AALAA* Yersi_molla (A)ANDSQYES----------------------AALAA* Yersi_berco (A)ANDSQYES----------------------AALAA* Uncul_weevi (A)ANDSQYES----------------------AVLAA* Mannh_haemo (A)ANDEQ-------------------------YALAA** Mannh_succi (A)ANDEQ-------------------------YALAA** Haemp_ducre (A)ANDEQ-------------------------YALAA** Haemp_ducr2 (A)ANDEQ-------------------------YALAA** Haemp_infl1 (A)ANDEQ-------------------------YALAA** Haemp_infl2 (A)ANDEQ-------------------------YALAA** Haemp_infl3 (A)ANDEQ-------------------------YALAA** Haemp_infl4 (A)ANDEQ-------------------------YALAA** Haemp_somnu (A)ANDEQ-------------------------YALAA** Pasta_multo (A)ANDEQ-------------------------YALAA** Actbl_actin (A)ANDEQ-------------------------YALAA** Actbl_succi (A)ANDEQ-------------------------YALAA** Actbl_pleu1 (A)ANDEQ-------------------------YALAA** Actbl_pleu2 (A)ANDEQ-------------------------YALAA** Magcocc_MC1 (A)ANDEHYAP----------------------AFAAA* Uncult_HF10 (A)AKPK--------------------------LAVAA* Prbr_SAR1_1 (A)GENAD-------------------------YALAA* Prbr_SAR1_2 (A)ANNYN-------------------------YSLAA* Prbr_SAR1_3 (A)ADNG--------------------------YMAAA* Uncul_phako (A)ANDNS-------------------------YALAA* Lawso_intra (A)ANNNYD------------------------YALAA* Desvb_desu1 (A)ANNDYD------------------------YAYAA** Desvb_desu2 (A)ANNDYE------------------------YAMAA* Desvb_vulga (A)ANNYD-------------------------YALAA* Destl_pschr (A)ADDYN-------------------------YAVAA** Uncul_cion1 (A)ATLTTTGSANDEFFD---------------ARLRA* Syntr_acidi (A)ANDYE-------------------------YALAA* Geobr_sulfu (A)ADNYD-------------------------YAVAA** Geobr_metal (A)ADNYD-------------------------YAVAA* Desfm_aceto (A)ADTDVS------------------------YALAA* Bvora_marin (A)AESNFA------------------------PAMAA* Bdell_bacte (A)GND---------------------------YALAA* Myxoc_xanth (A)ANDNVE------------------------LALAA* Wolin_succi (A)ANNANYAPA---------------------YAKAA* Campbr_lari (A)ANNVKFAPA---------------------YAKAA* Campb_upsal (A)ANNAKFAPA---------------------YAKVA* Campb_fetus (A)ANNVKFAPA---------------------YAKAA* Campb_fetu2 (A)ANNVKFAPA---------------------YAKAA* Campbl_coli (A)ANNVKFAPA---------------------YAKAA* Campb_coli2 (A)ANNVKFAPA---------------------YAKAA* Campb_jejun (A)ANNVKFAPA---------------------YAKAA* Helcb_pylo1 (A)VNNTDYAPA---------------------YAKAA* Helcb_pylo2 (A)VNNTDYAPA---------------------YAKAA* Helcb_pylo3 (A)VNNADYAPA---------------------YAKAA* Helcb_muste (A)ANNKNYAPA---------------------YAKVA* Helcb_hepat (A)ANNANYAPA---------------------YAKVA* Helcb_ganma (A)ANNANYAPA---------------------YAKVA* Alkph_metal (A)ANDNY-------------------------SLAAA** Clost_aceto (A)DNENN-------------------------LALAA* Clost_perf1 (A)AEDN--------------------------FALAA* Clost_perf2 (A)AEDN--------------------------FALAA* Clost_perf3 (A)ARDN--------------------------FALAA* Clost_therm (A)ANEDNY------------------------ALAAA* Clost_botul (A)ANDN--------------------------FALAA** Clost_tetan (A)ADDN--------------------------FVLAA* Clost_diffi (A)ADDN--------------------------FAIAA* Clost_diff2 (A)ADDN--------------------------FAIAA* Rumin_albus (A)DNDN--------------------------FAMAA* Destb_hafni (A)ANDDN-------------------------YALAA* Caldc_sacch (A)ADKAE-------------------------LALAA* Crbth_hydro (A)ANEN--------------------------YALAA** Helio_mobil (A)AEDN--------------------------YALAA* Thana_tengc (A)ADRE--------------------------LAYAA* Copth_prote (A)AEPE--------------------------FALAA* Moore_therm (A)ADDN--------------------------LALAA* Mespl_floru (A)ANKNEENTNEVPTFMLNAGQA---------NYAFA* Spipl_kunke (A)ASKKQKEDKIEMPAFMMNNQLAV-------SMLAA* Mycpl_capri (A)ANKNEETFEMPAFMMNNASAGA--------NFMFA** Mycpl_mycoi (A)ADKNEENFEMPAFMINNASAGA--------NYMFA** Urepl_parvu (A)AENKKSSEVELNPAFMASATNAN-------YAFAY* Mycpl_pulmo (A)GTKKQENDYQDLMISQNLNQNL--------AFASV* Mycpl_mobil (A)GKEKQLEVSPLLMSSSQS------------NLVFA* Uncul_toxo1 (A)GKENKKEDYSLLMNASTQSN----------LAFAF* Uncul_toxo2 (A)GKENKKEDYSLLMNASTQSN----------LAFAF* Uncul_humn4 (A)GKENKKEDYSLLMNASTQSN----------LAFAF* Uncul_humn5 (A)GKENKKEDYSLLMNASTQSN----------LAFAF* Uncul_humn6 (A)GKENKKEDYSLLMNASTQSN----------LAFAF* Mycpl_penet (A)AKNNKNEAVEVELNDFEINALSQNAN----LALYA* Mycpl_arthr (A)GNLETSEDKKLDLQFVMNSQTQQ-------NLLFA** Mycpl_genit (A)DKENNEVLVDPNLIINQQASV---------NFAFA* Mycpl_pneum (A)DKNNDEVLVDPMLIANQQASI---------NYAFA* Mycpl_hyop1 (A)AKNSKKSPNEAKIDYPFLSYNQL-------NFAYV* Mycpl_hyop2 (A)AKNSKKSPNEAKIDYPFLSYNQL-------NFAYV* Mycpl_galli (A)DKTSKELADENFVLNQLASNN---------YALNF* Phtpl_aste1 (A)GNNKQTVTNTQDFAGQTPVYQMNFANSFSSQLAFA* Phtpl_aste2 (A)GNKKQTATNTQDFAGQTPVYQMNFVNSFSSQLAFA* Paeni_larva (A)GKQQNN------------------------YALAA** Paeni_macer (A)GKQQNN------------------------FALAA** Bacil_anthr (A)GKQNN-------------------------LSLAA* Bacil_thur1 (A)GKQNN-------------------------LSLAA* Bacil_thur2 (A)GKQNN-------------------------LSLAA* Bacil_cere1 (A)GKQNN-------------------------LSLAA* Bacil_cere2 (A)GKQNN-------------------------LSLAA* Bacil_cere3 (A)GKQNN-------------------------LSLAA* Bacil_megat (A)GKSNNN------------------------FALAA*** Bacil_halod (A)GKENNN------------------------FALAA* Bacil_claus (A)GKENNN------------------------FALAA* Bacil_subti (A)GKTNSFNQN---------------------VALAA** Bacil_liche (A)GKSNQN------------------------LALAA* Geobl_stear (A)GKQN--------------------------YALAA* Geobl_kaust (A)GKQN--------------------------YALAA* Exiguoba_sp (A)GKTNT-------------------------QLAAA** Ocebl_iheyi (A)GKETNQP-----------------------VLAAA* Stapc_sapro (A)GKENNN------------------------FAVAA** Stapc_xylos (A)GKENNN------------------------FAVAA** Stapc_aure1 (A)GKSNNN------------------------FAVAA* Stapc_aure2 (A)GKSNNN------------------------FAVAA* Stapc_aure3 (A)GKSNNN------------------------FAVAA* Stapc_aure4 (A)GKSNNN------------------------FAVAA* Stapc_aure5 (A)GKSNNN------------------------FAVAA* Stapc_aure6 (A)GKSNNN------------------------FAVAA* Stapc_epid1 (A)DKSNNN------------------------FAVAA** Stapc_epid2 (A)DKSNNN------------------------FAVAA** Stapc_epid3 (A)DKSNNN------------------------FAVAA** Lista_mono1 (A)GKEKQN------------------------LAFAA** Lista_mono2 (A)GKEKQN------------------------LAFAA** Lista_mono3 (A)GKEKQN------------------------LAFAA** Lista_inno1 (A)GKEKQN------------------------LAFAA** Lista_inno2 (A)GKEKQN------------------------LAFAA** Lista_inno3 (A)GKEKQN------------------------LAFAA** Lista_welsh (A)GKEKQN------------------------LAFAA** Lista_seeli (A)GKEKQN------------------------LAFAA** Lista_gray1 (A)GKEKQN------------------------LAFAA** Lista_gray2 (A)GKQNNN------------------------LAFAA** Lista_ivano (A)GKEKQN------------------------LAFAA** Lacbl_gasse (A)ANNENS------------------------YAVAA* Lacbl_johns (A)ANNENS------------------------YAVAA* Lacbl_sakei (A)ANNNNS------------------------YAVAA* Lacbl_delb1 (A)AKNENNS-----------------------YALAA* Lacbl_delb2 (A)ANENS-------------------------YAVAA* Lacbl_casei (A)AKNENS------------------------YALAA** Lactb_aciph (A)ANNKNS------------------------YALAA* Lacbl_helve (A)ANNKNS------------------------YALAA* Lacbl_galli (A)ANNKNS------------------------YALAA* Lacbl_plan1 (A)AKNNNNS-----------------------YALAA** Lacbl_plan2 (A)AKNNNNS-----------------------YALAA** Lacbl_brevi (A)AKNNNNS-----------------------YALAA** Pedio_pento (A)AKNNNNS-----------------------YALAA*** Leuno_mesen (A)AKNENS------------------------FAIAA* Leuno_lacti (A)AKNENS------------------------FAIAA* Leuno_pseud (A)AKNENS------------------------YAIAA* Oenoco_oeni (A)AKNNEPS-----------------------YALAA* Entco_duran (A)AKNENNS-----------------------YALAA* Entco_faecm (A)AKNENNS-----------------------YALAA* Entco_faes1 (A)AKNENNS-----------------------FALAA* Entco_faes2 (A)AKNENNS-----------------------FALAA* Strpco_equi (A)AKNNTT------------------------YALAA* Strpc_zooep (A)AKNNTT------------------------YALAA* Strpc_suis1 (A)AKNTNT------------------------YALAA** Strpc_suis2 (A)AKNTNT------------------------YALAA** Strpc_uberi (A)AKNTNS------------------------YALAA* Strpc_pyog1 (A)AKNTNS------------------------YALAA* Strpc_pyog2 (A)AKNTNS------------------------YALAA* Strpc_pyog3 (A)AKNTNS------------------------YALAA* Strpc_agal1 (A)AKNTNS------------------------YALAA* Strpc_agal2 (A)AKNTNS------------------------YALAA* Strpc_mutan (A)AKNTNS------------------------YAVAA* Strpc_gordo (A)AKNNTS------------------------YALAA* Strpc_pneu1 (A)AKNNTS------------------------YALAA* Strpc_pneu2 (A)AKNNTS------------------------YALAA* Strpc_pneu3 (A)AKNNTS------------------------YALAA* Strpc_mitis (A)AKNNTS------------------------YALAA* Strpc_sobri (A)AKNTNS------------------------YAVAA* Strpc_ther1 (A)AKNTNS------------------------YAVAA* Strpc_ther2 (A)AKNTNS------------------------YAVAA* Strpc_ther3 (A)AKNTNS------------------------YAVAA* Laccc_raffi (A)AKNTQT------------------------YAVAA* Laccc_plant (A)AKNTQT------------------------YALAA* Laccc_garvi (A)AKNNTS------------------------YALAA* Laccc_lact1 (A)AKNNTQT-----------------------YAMAA* Laccc_lact2 (A)AKNNTQT-----------------------YAMAA* Laccc_lact3 (A)AKNNTQT-----------------------YAMAA* Laccc_lact4 (A)AKNNTQT-----------------------YAMAA* Actmy_naesl (A)ADNTRTD-----------------------FALAA* Uncul_hook2 (A)ADNKRTD-----------------------FALAA* Brevi_linen (A)AKSNNRTD----------------------FALAA* Artbr_sFB24 (A)AKQTRTD-----------------------FALAA* Troph_whipp (A)ANLKRTD-----------------------LSLAA* Clavi_michi (A)ANNKQSS-----------------------FVLAA* Leifso_xyli (A)ANSKSTVSAKAD------------------FALAA* Coryn_dipht (A)AENTQRD-----------------------YALAA* Coryn_gluta (A)AEKSQRD-----------------------YALAA* Coryn_effic (A)AEKTQRD-----------------------YALAA* Gordo_rubri (A)ADSNQRD-----------------------YALAA* Mycbm_aviu1 (A)ADSHQRD-----------------------YALAA* Mycbm_aviu2 (A)ADSHQRD-----------------------YALAA* Mycbm_scrfl (A)ADSHQRD-----------------------YALAA* Mycbm_intra (A)ADSHQRD-----------------------YALAA* Mycbm_xenop (A)ADSHQRD-----------------------YALAA* Mycbm_flave (A)ADSNQRD-----------------------YALAA* Mycbm_malmo (A)AVSTQRD-----------------------YALAA* Mycbm_szulg (A)AENTQRD-----------------------FALAA* Mycbm_chelo (A)ADSHQRD-----------------------YALAA* Mycbm_kansa (A)ADSHQRD-----------------------YALAA* Mycbm_gordo (A)ADSHQRD-----------------------YALAA* Mycbm_bovis (A)ADSHQRD-----------------------YALAA* Mycbm_micr1 (A)ADSHQRD-----------------------YALAA* Mycbm_micr2 (A)ADSHQRD-----------------------YALAA* Mycbm_tube1 (A)ADSHQRD-----------------------YALAA* Mycbm_afric (A)ADSHQRD-----------------------YALAA* Mycbm_tube2 (A)ADSHQRD-----------------------YALAA* Mycbm_lepra (A)ADSYQRD-----------------------YALAA* Mycbm_mari1 (A)ADSHQRD-----------------------YALAA* Mycbm_mari2 (A)ADSHQRD-----------------------YALAA* Mycbm_smegm (A)ADSNQRD-----------------------YALAA* Nocar_farci (A)ADSHQRE-----------------------YALAA* Nocar_aste1 (A)ADSNQRD-----------------------YALAA* Nocar_aste2 (A)ADSNQRD-----------------------YALAA* Rhococ_equi (A)AESTQRE-----------------------YALAA* Propi_acne1 (A)AENTRTD-----------------------FALAA* Propi_acne2 (A)AENTRTD-----------------------FALAA* Propi_acnp1 (A)AENTRTD-----------------------FALAA* Propi_acnp2 (A)AENTRTD-----------------------FALAA* Stmyc_coeli (A)ANTKRDSSQQA-------------------FALAA* Stmyc_livid (A)ANTKRDSSQQA-------------------FALAA* Stmyc_scabi (A)ANSKSDSPQQQ-------------------FSLAA* Stmyc_colli (A)ANTKRDSSS---------------------FALAA* Stmyc_aureo (A)ANSKRDSQQ---------------------FALAA** Stmyc_averm (A)ANTKSDSQS---------------------FALAA** Thbif_fusca (A)ANSKRTE-----------------------FALAA* Kineo_radio (A)ADSKRTE-----------------------FALAA* Frnkia_CcI3 (A)AANKTQPTTPT-------------------YALAA* Frnkia_EAN1 (A)AATKTQPASST-------------------FALAA* Bifid_long1 (A)AKSNRTE-----------------------FALAA* Bifid_long2 (A)AKSNRTE-----------------------FALAA* Rbrbr_xylan (A)ANDRE-------------------------MALAA* Gemma_obscu (A)AEPQ--------------------------YSLAA* Rhopi_balti (A)AEEN--------------------------FALAA* Chlam_trac1 (A)AEPKAECEIISFADLED-------------LRVAA* Chlam_trac2 (A)AEPKAECEIISFADLED-------------LRVAA* Chlam_trac3 (A)AEPKAECEIISFADLED-------------LRVAA* Chlam_murid (A)AEPKAECEIISFADLND-------------LRVAA* Chlap_pneum (A)AEPKAECEIISLFDSVE-------------ERLAA* Chlap_cavia (A)AEPKAECEIISFSDLTE-------------ERLAA* Chlap_abort (A)AEPKAKCEIISFSELSE-------------QRLAA* Pchla_UWE25 (A)ANNSNKIAKVDFQEGT--------------FARAA* Verru_spino (A)ANSNE-------------------------LALAA* Borre_burgd (A)AKNNNFTSSN--------------------LVMAA* Borre_garin (A)AKNNNFTSSN--------------------LVMAA* Trepo_palli (A)ANSDSFD-----------------------YALAA* Trepo_denti (A)AENNDSFD----------------------YALAA* Lepta_inter (A)ANNE--------------------------LALAA* Fibro_succi (A)ADEN--------------------------YALAA* Acibm_capsu (A)ANNN--------------------------LALAA* Solib_usita (A)ANTQ--------------------------FAYAA* Uncul_farm2 (A)ANNTQ-------------------------FAYAA* Fusob_nucl1 (A)GNKD--------------------------YALAA* Fusob_nucl2 (A)GNKE--------------------------YALAA* Fusob_nucl3 (A)GNKE--------------------------YALAA* Dicgl_therm (A)ANTN--------------------------LALAA*