Agrbm_tume1_0213 - Agrobacterium tumefaciens pre-tmRNA, version 1 (precursor permuted) {C58}

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Agrobacterium tumefaciens pre-tmRNA, version 1 (precursor permuted) {C58}:


    .   10    .   20    .   30    .   40    .   50
GCCGGGGCAACCCGGCUAUGGCGAUAAACGGUCGGUGUAAUAAACCUAUU
GGACCCGGGGGCGGUACCCGGCGCCUCCACCAaaaaccggcgggaucuca
agaugaggccggcuuuugauGGGGGCGAAAUAGGAUCGACAAGGGCGUAA
AGAUCGAACUUUUGCUCGGCAUGAUACCGCCGUUAUCGGGUCACAAGUGU
AGUUGCAAAUGACAACAACGCUAAGGAAUACGCUCUCGCUGCCUAAUGGC
GGUGCGGGAAUUCCGCUCUAAGUCCUUACGGUUAGCCCCGUAAGGCGGGG
UUCGGAGGUACCUGGCAACAGAAACCUCCACCU

Two-Piece Mature tmRNA: Acceptor piece, nt 1-79; Coding piece, nt 121-333;
Internal Spacer, nt 80-120
See secondary structure diagram;

Proteolysis Tag: (A)ANDNNAKEYALAA*
Reading Frame (underlined): nt 205-246

Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group

Sequencing:
Agrobacterium tumefaciens str. C58, nt 77-409 of AE009156.1 (and nt 2007028-2007360 of NC_003062.1) [Ref 1];
Agrobacterium tumefaciens str. C58, nt 4246-4578 of AE008121.1 (and nt 2007141-2007473 of NC_003304.1) [Ref 2]

Identification: [Ref 3]

Reference:
1. Goodner et al (2001) Science 294:2323-8
2. Wood et al (2001) Science 294:2317-23
3. K Williams and B Goldman (of Monsanto genome project) (7-Feb-2000)

Posted: 29-Aug-2001

tmRNA Website ID: Agrbm_tume1_0213

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