Agrbm_vitis_0633 - Agrobacterium vitis pre-tmRNA (precursor permuted)

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Agrobacterium vitis pre-tmRNA (precursor permuted):


    .   10    .   20    .   30    .   40    .   50
GCCGGUGCUUGCAUCGGCUAUGGCAAUAAACGGUCGGUGAAAUAAACCUA
UUGGACCCGGGGGCGGUACCCGGCGCCUCCACCAaaaaccggucggucuu
ugugaccggcuuuugauGGGGGCGAAAUAGGAUCGACAAGGGCGUAAAGA
UCGAACUUUUGCUCGGCAUGAUACCACCGUCAUCGGGUCACAAGUGUAGU
UGCAAAUGACAACAACGCUCAGGGUUACGCUGUCGCUGCUUAAUCGCGGU
GCCAGAAACCCAAACUAAGUCCUUACGGGUAGCACCGUAAGGCGGGGUUC
GGAGGUACCUGGCAACAGAAACCUCCACUU

Two-Piece Mature tmRNA: Acceptor piece, nt 1-81; Coding piece, nt 118-330;
Internal Spacer, nt 82-117
See secondary structure diagram;

Proteolysis Tag: (A)ANDNNAQGYAVAA*
Reading Frame (underlined): nt 202-243

Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group

Sequencing:
Agrobacterium vitis S4, nt 573-244 of gnl|ti|683549513 {NCBI trace archive} [Ref 1]

Identification: [Ref 2]

Reference:
1. Unavailable (2005)
2. K Williams (15-Feb-2005)

Posted: 15-Feb-2005

tmRNA Website ID: Agrbm_vitis_0633

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