Anapl_margi_0236 - Anaplasma marginale pre-tmRNA (precursor permuted)

[Preceding] [Next] in database
Anaplasma marginale pre-tmRNA (precursor permuted):


    .   10    .   20    .   30    .   40    .   50
GUGGUUUCACUAUGGCAAUAAAGGCCUCUUGGAAUAGGCGUUUUGGACCC
GAGGGCAGUGCUCGGCAUCUCCACuguugcuuuguauGGGGAUGAAACAG
GAUAGACAGACGCAAUAAAGAGGACGGCGUUUGCUCGGUGGGAAUUCCAG
CCGUAUAAGUGGGUCAUUUUUAUAAGUGCAAACGAUGAUUUCGUUGCCGC
UAAUGAUAACAUGGAAACAGCUUUCGUAGCUGCUGCCUAGUUUUUGUCUU
UAGCGCGGUUUUGGGGGCUUACCGGGCAACAGAAAAGCCCCCGCCA

Two-Piece Mature tmRNA: Acceptor piece, nt 1-73; Coding piece, nt 88-296;
Internal Spacer, nt 74-87
Mature tmRNA acceptor piece has 3-prime CCA tail;

Proteolysis Tag: (A)ANDDFVAANDNMETAFVAAA*
Reading Frame (underlined): nt 178-240

Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae

Sequencing:
Anaplasma marginale str. St. Maries, nt 459795-459500 of CP000030.1 (and nt 459795-459500 of NC_004842.2) [Ref 1]

Identification: [Ref 2] while genome-in-progress at NCBI

Reference:
1. Brayton et al (2005) PNAS (Epub 2004)
2. K Williams (9-Oct-2003)

Posted: 9-Oct-2003

tmRNA Website ID: Anapl_margi_0236

[Preceding] [Next] in database