Anapl_phago_0235 - Anaplasma phagocytophilum pre-tmRNA (precursor permuted)

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Anaplasma phagocytophilum pre-tmRNA (precursor permuted):


    .   10    .   20    .   30    .   40    .   50
GUGAUCUUUCACUAUGGCAAUAAAAGUUACUUGGAAUAGACGUUUUGGAC
CCGAGGGCAGUGCUCGGCAUCUCCACguguuugcGGGGAUGAGACAGGUU
AGACAGGCGUAGUAAAGAAGCUGGCUGUUGCUCGGUGGGAAUUCCAGCCG
UAUAAUUGGGUCAUAUUUAUAAGUGCAAACGAUGAUUUCGUUGCCGCUAA
UGACAACGUGGAAACAGCUUUCGUAGCUGCAGCCUAGUGUGCCUUUAGCG
CGGUCUCGGAGGCUUACCGGGCAACAGAAAAGCCUCCAUUU

Two-Piece Mature tmRNA: Acceptor piece, nt 1-75; Coding piece, nt 85-291;
Internal Spacer, nt 76-84
Mature tmRNA acceptor piece has 3-prime CCA tail;

Proteolysis Tag: (A)ANDDFVAANDNVETAFVAAA*
Reading Frame (underlined): nt 175-237

Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae

Sequencing:
Anaplasma phagocytophilum HZ, nt 62649-62939 of contig 115 (63108 bp) [Ref 1]

Identification: [Ref 2] in sequence data at TIGR

Reference:
1. TIGR (25-Nov-2002)
2. K Williams (25-Nov-2002)

Posted: 25-Nov-2002

tmRNA Website ID: Anapl_phago_0235

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