Borde_pertu_0295 - Bordetella pertussis tmRNA

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Bordetella pertussis tmRNA:


    .   10    .   20    .   30    .   40    .   50
GGGGCCGAUCCGGAUUCGACGUGGGUCAUGAAACAGCUCAGGGCAUGCCG
AGCACCAGUAAGCUCGUUAAUCCACUGGAACACUACAAACGCCAACGACG
AGCGUUUCGCUCUCGCCGCUUAAGCGGUGAGCCGCUGCACUGAUCUGUCC
UUGGGUCAGGCGGGGGAAGGCAACUUCCCAGGGGGCAACCCCGAACCGCA
GCAGCGACAUUCACAAGGAAUCGGCCACCGCUGGGGUCACACGGCGUUGG
UUUAAAUUACGUGAAUCGCCCUGGUCCGGCCCGUCGAUCGGCUAAGUCCA
GGGUUAAAUCCAAAUAGAUCGACUAAGCAUGUAGAACUGGUUGCGGAGGG
CUUGCGGACGGGGGUUCAAUUCCCCCCGGCUCCACCA

{NOTE: Identical to B. bronchiseptica tmRNA and B. parapertussis tmRNA}

Proteolysis Tag: (A)ANDERFALAA*
Reading Frame (underlined): nt 91-123

Taxonomy: Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae

Sequencing:
Bordetella pertussis Tohama I, nt 282336-281950 of BX640413.1 (and nt 976766-976380 of NC_002929.2) [Ref 1]

Identification: [Ref 2] in sequence data at The Sanger Centre
Alignment: [Ref 3]

Reference:
1. Parkhill et al (2003) Nat Genet 35:32-40
2. K Williams (14-Sep-1998)
3. Felden et al (2001) Nucleic Acids Res 29:1602-7

Posted: 14-Sep-1998

tmRNA Website ID: Borde_pertu_0295

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