Lacbl_casei_0529 - Lactobacillus casei pre-tmRNA

[Preceding] [Next] in database
Lactobacillus casei pre-tmRNA:


    .   10    .   20    .   30    .   40    .   50
GGGGGUGUAAUGGUCUCGACAUUGCUUUUCGCACAUGCAGUGCACCUCGG
AGGCUCGGCUCCGUCAUCAACGGAACAGUUAAUAUAACUGCAAAGAACGA
AAAUUCUUACGCUUUAGCUGCUUAAUAACCAGCUAGCGUGAUCCUUCCGA
CUUCGCUCAAGGGUCGGGUCUGGGUCUCAAAUUAUUGAGCUACGGUUAAU
GUUGCCACCUGAGGCAUUAACAAGAGACUAGUAGGUUAGCUGCGUUGUGU
UAGCCUUGCUGGCUGGCGCGACAUCGCGGCGAAUUUUAAAUAAGUCAGCU
AUAGGUGUAGAGCUGCAUGUAGCAGGGGUGAUGGACAGGAGUUCGAUUCU
CCUCACCUCCAuua

Mature tmRNA has 3-prime CCA tail;

Proteolysis Tag: (A)AKNENSYALAA**
Reading Frame (underlined): nt 90-125

Taxonomy: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae

Sequencing:
Lactobacillus casei ATCC 334, nt 30036-30399 of AAGR01000008.1 (and nt 30036-30399 of NZ_AAGR01000008.1) [Ref 1]

Identification: [Ref 2] in sequence data at DOE Joint Genome Institute

Reference:
1. DOE Joint Genome Institute (2005) Unpublished
2. K Williams (24-Apr-2003)

Posted: 9-Jun-2003

tmRNA Website ID: Lacbl_casei_0529

[Preceding] [Next] in database