Lactb_aciph_0610 - Lactobacillus acidophilus pre-tmRNA

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Lactobacillus acidophilus pre-tmRNA:


    .   10    .   20    .   30    .   40    .   50
GGGGAUGUUUUGGGAUUCGACAGGCGUAGACCCGCAUUGACUGCGAUUCG
UAGGUUACGUCUACGUAAAAACGUUACAGUUAAAUAUAACUGCAAAUAAC
AAAAAUUCUUACGCAUUAGCUGCUUAAUUUAGCGCAUGCGUUGCUCUUGA
CCAGUUUACUCGUGACUGGUUUUCGAGUAUCAACUUUAGCGAGUUACGUU
UAACUACCUCACCUGAAUAGUUAAAAAGAGUCUUAACAGGUUAGCUGGUU
CAUACUAGCCCUGUUAUAUGGCGUUUUGAACUAGUGAAGUUUAAGUAAUA
UAACUAUGAUCGUAGAGGUUAAUGACGAGAUGCGUUUGGACAGGGGUUCA
AUUCCCCUCAUCUCCAuag

Mature tmRNA has 3-prime CCA tail;

Proteolysis Tag: (A)ANNKNSYALAA*
Reading Frame (underlined): nt 92-127

Taxonomy: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae

Sequencing:
Lactobacillus acidophilus NCFM, nt 728515-728883 of CP000033.1 (and nt 728515-728883 of NC_006814.1) [Ref 1]

Identification: [Ref 2]

Reference:
1. Alterman et al (2005) PNAS:In press
2. K Williams (1-Feb-2005)

Posted: 1-Feb-2005

tmRNA Website ID: Lactb_aciph_0610

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