Psmon_aerug_0322 - Pseudomonas aeruginosa tmRNA

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Pseudomonas aeruginosa tmRNA:


    .   10    .   20    .   30    .   40    .   50
GGGGCCGAUUAGGAUUCGACGCCGGUAACAAAACUUGAGGGGCAUGCCGA
GCUGGUAGCAGAACUCGUAAAUUCGCUGCUGCAAACUUAUAGUUGCCAAC
GACGACAACUACGCUCUAGCUGCUUAAUGCGGCUAGCAGUCGCUAGGGGA
UGCCUGUAAACCCGAAACGACUGUCAGAUAGAACAGGAUCGCCGCCAAGU
UCGCUGUAGACGUAACGGCUAAAACUCAUACAGCUCGCUCCAAGCACCCU
GCCACUCGGGCGGCGCGGAGUUAACUCAGUAGAGCUGGCUAAGCAUGUAG
AACCGAUAGCGGAGAGCUGGCGGACGGGGGUUCAAAUCCCCCCGGCUCCA
CCA

Proteolysis Tag: (A)ANDDNYALAA*
Reading Frame (underlined): nt 95-127

Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae

Sequencing:
Pseudomonas aeruginosa {strain ATCC 25330}, nt 22-330 of U68078.1 [Ref 1];
Pseudomonas aeruginosa PAO1, nt 7001-6649 of AE004517.1 (and nt 901872-901520 of NC_002516.1) [Ref 2];
Pseudomonas aeruginosa UCBPP-PA14, nt 203431-203079 of AABQ07000002.1 (and nt 203431-203079 of NZ_AABQ07000002.1) [Ref 3];
Pseudomonas aeruginosa {clinical strain 1-60}, nt 527-175 of BZ552150.1 (and nt 462-110 of BZ554992.1) [Ref 4];
Pseudomonas aeruginosa {clinical strain 2-164}, nt 696-343 of BZ558699.1 {here CORRECTED} [Ref 4];
Pseudomonas aeruginosa 2192, nt 33048-32696 of AAKW01000081.1 (and nt 33048-32696 of NZ_AAKW01000081.1) [Ref 5]

Identification: [Ref 1]

Reference:
1. Williams and Bartel (1996) RNA 2:1306-10
2. Stover et al (2000) Nature 406:959-64
3. Montgomery et al (2003) Unpublished
4. Spencer et al (2002) J Bacteriol 185:1316-25
5. Birren et al (2006) Unpublished

Posted: 10-Sep-1997

tmRNA Website ID: Psmon_aerug_0322

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