Uncul_whal6_0680 - Uncultured whale6 pre-tmRNA (precursor permuted)

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Uncultured whale6 pre-tmRNA (precursor permuted):


    .   10    .   20    .   30    .   40    .   50
GCUGCGCAAGCAGCUAUGACAAUAAACGAGCGUUGCAAUAAACCAUUCGG
ACCCGGGGGCGGUACCCGGCGCCUCCACCAugauccggccuguugccggc
aaacggccuuagcggccggaugaugauGGGGGCGAAACAGGAUCGACGAG
GGUGUAAAGAGCGACUUUUUGUUCGGUAUUGUACCACCGUUAUCGGGCUA
AACUUGUAGUUGCAAAUGACAACUAUGCGGAAGCUCGUCUCGCUGCUUAA
UUGCGGUGUGACACUUCACAUUAAGCCCUAGAGGGUCGCACUUCUAGGCG
GGGUUCGGAGGUACCUGGCAACAGAAACCUCCACUU

Two-Piece Mature tmRNA: Acceptor piece, nt 1-77; Coding piece, nt 128-336;
Internal Spacer, nt 78-127

Proteolysis Tag: (A)ANDNYAEARLAA*
Reading Frame (underlined): nt 212-250

Taxonomy: {Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales}

Sequencing:
environmental sequence {Uncultured whale6, from gray whale carcass microbial mat in Santa Cruz Basin at 1674 m depth}, nt 542-207 of AAFZ01025482.1 [Ref 1]

Identification: [Ref 2] in AAFZ01025482.1

Reference:
1. Tringe et al (2005) Science 308:554-7
2. K Williams (18-May-2005)

Posted: 18-May-2005

tmRNA Website ID: Uncul_whal6_0680

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