Yersi_pesti_0413 - Yersinia pestis tmRNA

[Preceding] [Next] in database
Yersinia pestis tmRNA:


    .   10    .   20    .   30    .   40    .   50
GGGGCUGAUUCUGGAUUCGACGGGAUUCGCGAAACCCAAGGUGCAUGCCG
AGGUGCGGUGGCCUCGUAAAAAACCGCAAAAAAAAUAGUUGCAAACGACG
AAAACUACGCACUAGCAGCUUAAUAACCUGCUUAGAGCCCUCUCUCCCUA
GCCUCCGCUCUUAGGACGGGGAUCAAGAGAGGUCAAACCUAAAAGAGCUC
GUGUGGAAACCUUGCCUGGGGUGGAAGCAUUAAAACUAAUCAGGAUAGUU
UGUCAGUAGCGUGUCCAUCCGCAGCUGGCCGGCGAAUGUAAUGAUUGGAC
UAAGCAUGUAGUGCCGACGGUGUAGUAAUUUCGGACGGGGGUUCAAAUCC
CCCCAGCUCCACCA

{NOTE: Identical to Yersinia pseudotuberculosis tmRNA}

Proteolysis Tag: (A)ANDENYALAA**
Reading Frame (underlined): nt 91-123

Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae

Sequencing:
Yersinia pestis CO92, nt 126951-126588 of AJ414146.1 (and nt 1245951-1245588 of NC_003143.1) [Ref 1];
Yersinia pestis KIM, nt 10909-11272 of AE013908.1 (and nt 3388875-3389238 of NC_004088.1) [Ref 2];
Yersinia pestis biovar Medievalis str. 91001, nt 266324-266687 of AE017130.1 (and nt 1136978-1137341 of NC_005810.1) [Ref 3];
Yersinia pestis Angola, nt 63566-63929 of AAKS01000002.1 (and nt 63566-63929 of NZ_AAKS01000002.1) [Ref 4]

Identification: [Ref 5] in sequence data at The Sanger Centre

Reference:
1. Parkhill et al (2001) Nature 413:523-7
2. Deng et al (2002) J Bacteriol 184:4601-11
3. Song et al (2004) DNA Res 11:179-97
4. Worsham et al (2005) Unpublished
5. K Williams (1-Jul-1998)

Posted: 1-Jul-1998 Updated: 5-Nov-2005

tmRNA Website ID: Yersi_pesti_0413

[Preceding] [Next] in database